hanna 58999a8e9d Enhance the I/O management system to support custom headers and set the presorted flag ... from the initialize() method (or at any time before the first SAM record is written). git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2560 348d0f76-0448-11de-a6fe-93d51630548a		2010-01-12 18:21:42 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src	Enhance the I/O management system to support custom headers and set the presorted flag	2010-01-12 18:21:42 +00:00
test/org/broadinstitute/sting	Cleaned up the interface to VCFRecord. It's now possible (and easy) to create records and then write them with a VCFWriter.	2010-01-11 21:42:12 +00:00