depristo 4c9746f463 Disabled performance log intermediate commit. Will be refactored and committed to the responsiblity along with documentation ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4919 348d0f76-0448-11de-a6fe-93d51630548a		2011-01-02 22:18:12 +00:00
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alignment	Bug fixes for the bwa aligner and changes to support compiling against newer releases of the bwa code base.	2010-12-17 14:49:15 +00:00
analyzecovariates	Updating doc text	2010-11-24 21:34:14 +00:00
commandline	Fixed recently introduced multiplexer issue where DoC couldn't be written	2010-12-14 19:35:15 +00:00
datasources/pipeline	Updated from SnakeYAML 1.6 to 1.7.	2010-09-22 19:47:49 +00:00
gatk	Disabled performance log intermediate commit. Will be refactored and committed to the responsiblity along with documentation	2011-01-02 22:18:12 +00:00
jna	Removed LibBat.SUB2_BSUB_BLOCK since the use of it exits the JVM.	2010-12-14 19:57:20 +00:00
oneoffprojects	A significant refactoring of the ROD system, done largely to simplify the process of	2010-12-31 04:52:22 +00:00
playground	A significant refactoring of the ROD system, done largely to simplify the process of	2010-12-31 04:52:22 +00:00
queue	Updated the Queue GATK generator and packaging to include more dependencies for fullCallingPipeline.q.	2010-11-30 15:29:40 +00:00
utils	A significant refactoring of the ROD system, done largely to simplify the process of	2010-12-31 04:52:22 +00:00