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gatk-3.8/protected/java/test/org/broadinstitute/sting/utils/recalibration
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Guillermo del Angel 1d5b29e764 Unit tests for repeat covariates: generate 100 random reads consisting of tandem repeat units of random content and size, and check that covariates match expected values at all positions in reads. 
Fixed corner case where value of covariate at border between 2 tandem repeats of different length/content wasn't consistent
 		2013-01-29 15:23:02 -05:00
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ContextCovariateUnitTest.java Updated all JAVA file licenses accordingly 2013-01-10 17:06:41 -05:00
CycleCovariateUnitTest.java Updated all JAVA file licenses accordingly 2013-01-10 17:06:41 -05:00
QualQuantizerUnitTest.java Updated all JAVA file licenses accordingly 2013-01-10 17:06:41 -05:00
ReadCovariatesUnitTest.java Updated all JAVA file licenses accordingly 2013-01-10 17:06:41 -05:00
ReadGroupCovariateUnitTest.java Updated all JAVA file licenses accordingly 2013-01-10 17:06:41 -05:00
RecalDatumUnitTest.java Updated all JAVA file licenses accordingly 2013-01-10 17:06:41 -05:00
RecalUtilsUnitTest.java Updated all JAVA file licenses accordingly 2013-01-10 17:06:41 -05:00
RecalibrationReportUnitTest.java Updated all JAVA file licenses accordingly 2013-01-10 17:06:41 -05:00
RecalibrationTablesUnitTest.java Updated all JAVA file licenses accordingly 2013-01-10 17:06:41 -05:00
RecalibrationTestUtils.java Updated all JAVA file licenses accordingly 2013-01-10 17:06:41 -05:00
RepeatCovariatesUnitTest.java Unit tests for repeat covariates: generate 100 random reads consisting of tandem repeat units of random content and size, and check that covariates match expected values at all positions in reads. 2013-01-29 15:23:02 -05:00