Eric Banks 574d5b467f Bug fix for indel HMM: protect against situation where long reads (e.g. Sanger) in a pileup can lead to a read starting after the haplotype end for a given haplotype.		2012-12-09 02:09:34 -05:00
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downsampling	Fixes for bugs uncovered by unit tests	2012-11-06 16:07:40 -08:00
walkers	Bug fix for indel HMM: protect against situation where long reads (e.g. Sanger) in a pileup can lead to a read starting after the haplotype end for a given haplotype.	2012-12-09 02:09:34 -05:00