Eric Banks 6253ba164e Using --keepOriginalAC in SelectVariants was causing it to emit bad VCFs ... * This occurred when one or more alleles were lost from the record after selection * Discussed here: http://gatkforums.broadinstitute.org/discussion/comment/4718#Comment_4718 * Added some integration tests for --keepOriginalAC (there were none before)		2013-04-05 00:53:28 -04:00
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src/org/broadinstitute/sting	Critical bug fix for the case of duplicate map calls in ActiveRegionWalkers with exome interval lists.	2013-04-03 13:15:30 -04:00
test/org/broadinstitute/sting	Using --keepOriginalAC in SelectVariants was causing it to emit bad VCFs	2013-04-05 00:53:28 -04:00