19 lines
926 B
Plaintext
19 lines
926 B
Plaintext
##fileformat=VCFv4.1
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##FORMAT=<ID=GQ,Number=1,Type=Float,Description="Genotype Quality">
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##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
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##FORMAT=<ID=RD,Number=1,Type=Integer,Description="Read Depth (only filtered reads used for calling)">
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##source=UnifiedGenotyper
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##reference=human_b36_both.fasta
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#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT NA12878
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1 10001292 . G A 42.22 . . GT:RD:GQ 1/0:23:19.28
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1 10002963 . C G 42.22 . . GT:RD:GQ 0/1:30:33.07
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1 10005008 rs9 A T 123.78 . . GT:RD:GQ 1/1:30:8.26
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1 10006296 rs12129123 C T 42.23 . . GT:RD:GQ 0/1:7:2.91
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1 10023478 . G C 84.23 . . GT:RD:GQ 1/1:27:4.03
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1 10029362 rs99;rs999 T C 42.22 . . GT:RD:GQ 1/0:44:36.62
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1 10042312 . G C 31.81 . . GT:RD:GQ 1/0:24:5.85
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1 10044557 . C T 42.22 . . GT:RD:GQ 0/1:31:15.01
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1 10045603 . A G 40.26 . . GT:RD:GQ 0/1:15:7.94
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1 10048142 rs9999 A G 126.81 . . GT:RD:GQ 1/1:36:9.14
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1 10048580 . T A 42.22 . . GT:RD:GQ 1/0:33:23.49
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