Eric Banks 7eb3f54750 Added category docs for the remaining public walkers (I think I got them all). I removed a couple of totally unnecessary walkers.		2012-07-25 21:40:28 -04:00
..
src/org/broadinstitute/sting	Added category docs for the remaining public walkers (I think I got them all). I removed a couple of totally unnecessary walkers.	2012-07-25 21:40:28 -04:00
test/org/broadinstitute/sting/gatk/walkers	Context covariate optimizations were not suited for multiple threads, so I removed them (since that ended up being much, much easier than trying to make the covariates thread local). Added -nt 2 layer to BQSR integration tests to confirm that it now works with multiple threads.	2012-07-25 13:38:07 -04:00