Mark DePristo 564fe36d22 VariantRecalibrator's VQSR.vcf now contains NEG/POS labels ... -- It's useful to know which sites have been used in the training of the model. The recal_file emitted by VR now contains VCF info field annotations labeling each site that was used in the positive or negative training models with POSITIVE_TRAINING_SITE and/or NEGATIVE_TRAINING_SITE -- Update MD5s, which all changed now that the recal file and the resulting applied vcfs all have these pos / neg labels		2013-04-16 09:09:47 -04:00
..
java	VariantRecalibrator's VQSR.vcf now contains NEG/POS labels	2013-04-16 09:09:47 -04:00
scala/test/org/broadinstitute/sting/queue/pipeline/examples	Fix improper dependencies in QScripts used by pipeline tests, and attempt to fix the flawed MisencodedBaseQualityUnitTest	2013-02-27 04:45:53 -05:00