gatk-3.8/protected/java/src/org/broadinstitute/sting/utils
Ryan Poplin ef1d58b7ff Bugfix for hom ref records that aren't GVCF blocks. 2013-09-29 19:19:26 -04:00
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gvcf Bugfix for hom ref records that aren't GVCF blocks. 2013-09-29 19:19:26 -04:00
haplotype Address reviewer comments 2013-04-08 12:48:20 -04:00
haplotypeBAMWriter Created a single sample calling pipeline which leverages the reference model calculation mode of the HaplotypeCaller 2013-09-06 16:56:34 -04:00
pairhmm Retreived PairHMM benchmarks from archive and made improvements 2013-08-28 17:23:35 -04:00
recalibration Adding ability to use Ryan's PCR error modeling to the Haplotype Caller. 2013-08-16 01:53:04 -04:00