hanna 7a22f19366 More descriptive error when VerifyingSamIterator hits an inconsistent alignment. Also updated ... case UserException.MalformedBAM to match case of UserExceptio.MissortedBAM for consistency and ease-of-use. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5364 348d0f76-0448-11de-a6fe-93d51630548a		2011-03-03 03:55:24 +00:00
..
BoundedReadIteratorUnitTest.java	Convert GenomeLocParser into an instance variable. This change is required	2010-11-10 17:59:50 +00:00
LocusIteratorByStateUnitTest.java	A few minor modifications masquerading as significant changes according to	2011-02-03 17:59:19 +00:00
StingSAMIteratorAdapterUnitTest.java	Changing testing framework from junit -> testng, for its enhanced configurability.	2010-11-01 21:31:44 +00:00
VerifyingSamIteratorUnitTest.java	More descriptive error when VerifyingSamIterator hits an inconsistent alignment. Also updated	2011-03-03 03:55:24 +00:00