gatk3的最后一个经典版本3.8

ebanks 55013eff78 Re-revert back to point estimation for now. We need to do this right, just not yet. ... Also, it's safer to let colt do the log factorial calculations for us. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1503 348d0f76-0448-11de-a6fe-93d51630548a		2009-09-02 15:33:18 +00:00
R	Updated python files	2009-07-07 14:15:39 +00:00
c	Move non-java code out of playground.	2009-03-23 19:31:38 +00:00
doc	moved to wiki	2009-07-22 16:35:23 +00:00
java	Re-revert back to point estimation for now. We need to do this right, just not yet.	2009-09-02 15:33:18 +00:00
packages	Added VariantFiltrationWalker to GATK early release.	2009-09-02 02:17:50 +00:00
perl	A useful perl module for quick argument parsing.	2009-08-31 15:44:57 +00:00
python	Give usage message if no arguments provided.	2009-08-31 00:28:43 +00:00
scala/src	support for scala walkers	2009-08-28 00:15:01 +00:00
settings	Switched to Reflections (http://code.google.com/p/reflections/) project for	2009-07-21 18:32:22 +00:00
shell	Version 0.2.1 (released) of the TableRecalibrator	2009-06-25 22:50:55 +00:00
testdata	2009_02 release is no longer with us. Update the bam list.	2009-08-11 12:49:23 +00:00
build.xml	Nicer building of scala programs	2009-08-29 16:41:56 +00:00
ivy.xml	Switched to Reflections (http://code.google.com/p/reflections/) project for	2009-07-21 18:32:22 +00:00