kshakir 542d394e09 Cleaning up Queue debugging output. ... -l DEBUG with local programs now prints out the stdout/stderr of the programs as they are run. More documentation in the examples with a new even simpler CountReads example. Took out unused option to build Queue GATK extensions separately. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4025 348d0f76-0448-11de-a6fe-93d51630548a		2010-08-13 15:54:08 +00:00
..
config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src	Cleaning up Queue debugging output.	2010-08-13 15:54:08 +00:00
test	Moving pointer to b36 reference from /broad/1KG to /humgen/1kg	2010-08-13 00:54:34 +00:00