Eric Banks 05cbf1c8c0 FindBugs 'Efficiency' fixes		2012-08-16 15:40:52 -04:00
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src/org/broadinstitute/sting	FindBugs 'Efficiency' fixes	2012-08-16 15:40:52 -04:00
test/org/broadinstitute/sting/gatk/walkers	Fix for performance problem in GGA mode related to previous --regenotype commit. Instead of trying to hack around the determination of the calculation model when it's not needed, just simply overload the calculateGenotypes() method to add one that does simple genotyping. Re-enabling the Pool Caller integration tests.	2012-08-16 13:05:17 -04:00