ebanks 52659d02d4 ignore unmapped reads in all the indel walkers (since they're giving me overhead issues) ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1224 348d0f76-0448-11de-a6fe-93d51630548a		2009-07-13 16:51:11 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src/org/broadinstitute/sting	ignore unmapped reads in all the indel walkers (since they're giving me overhead issues)	2009-07-13 16:51:11 +00:00
test/org/broadinstitute/sting	Cleaning up, preparing to incorporate a better fix for Eric's problems with validation stringency in BAM files opened directly from the walkers.	2009-07-13 01:42:13 +00:00