gatk-3.8/java
hanna 5119bdb55e - Update DoC to support output to /dev/null.
- Add a release sanity check for DoC.
- Update release sanity checks with new command-line argument system.


git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4236 348d0f76-0448-11de-a6fe-93d51630548a
2010-09-08 23:43:18 +00:00
..
config Provide a default logger, some config settings, and some doc updates. 2009-04-29 02:06:05 +00:00
src - Update DoC to support output to /dev/null. 2010-09-08 23:43:18 +00:00
test Addition for Tim: recalculate the NM and UQ tags after realignment. Also, don't fix the insert size calculation, since that's done by fix mate information. 2010-09-08 04:02:14 +00:00