rpoplin 00453919d2 VQSR now only uses the valid polymorphic sites for training and truth sensitivity calculations. Any number of tracks whose ROD binding begins with the name truth can be used as truth sensitivity tracks. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5012 348d0f76-0448-11de-a6fe-93d51630548a		2011-01-18 20:48:19 +00:00
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queue	VQSR now only uses the valid polymorphic sites for training and truth sensitivity calculations. Any number of tracks whose ROD binding begins with the name truth can be used as truth sensitivity tracks.	2011-01-18 20:48:19 +00:00
scala	Removed stochasticity from IndelRealigner by random sampling using and seed based on the read list.	2011-01-07 22:03:36 +00:00