gatk3的最后一个经典版本3.8

Mauricio Carneiro 5003deafb6 Fixing split-reads unit tests ... The new implementation calls for the number of bases to chop, not the chop index anymore, so 0 is no longer appropriate.		2013-01-27 23:38:46 -05:00
licensing	Refrain from pushing symlinks into the repo... not all filesystems treat it correctly	2013-01-22 15:18:19 -07:00
protected/java	Tool to calculate per base coverage distribution	2013-01-27 23:38:46 -05:00
public	Add join call to Progress meter unit test so we actually know the daemon thread has finished	2013-01-27 16:52:45 -05:00
settings	Final r119 tribble jar	2012-11-02 14:30:33 -04:00
.gitignore	Fixing the licensing scripts	2013-01-26 13:42:49 -05:00
build.xml	Updating Queue maven version to 0.0.2	2013-01-10 13:46:49 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	ReadBackedPileup cleanup	2013-01-11 15:17:18 -05:00