Khalid Shakir 4ffb43079f Re-committing the following changes from Dec 18: ... Refactored interval specific arguments out of GATKArgumentCollection into InvtervalArgumentCollection such that it can be used in other CommandLinePrograms. Updated SelectHeaders to print out full interval arguments. Added RemoteFile.createUrl(Date expiration) to enable creation of presigned URLs for download over http: or file:.		2013-01-16 12:43:15 -05:00
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config	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
src	Re-committing the following changes from Dec 18:	2013-01-16 12:43:15 -05:00
test	Re-committing the following changes from Dec 18:	2013-01-16 12:43:15 -05:00