Matt Hanna 4fa5045e84 Abandoning classfileset/rootfileset approach due to difficulting managing ... classloading of bcel*.jar/ant-apache-bcel*.jar. Switching instead to manually specifying a minimal set of packages/classes to include in the vcf.jar via build.xml, and adding a unit test which creates a limited classloader only aware of vcf.jar and tribble.jar and tries to use it to load the core classes in the vcf jar. Hopefully third time's the charm.		2011-10-06 12:49:51 -04:00
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config	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
src	Ensure that IndelRealigner n-way out option supports MD5 generation.	2011-10-05 20:36:28 -04:00
test	Abandoning classfileset/rootfileset approach due to difficulting managing	2011-10-06 12:49:51 -04:00