Mauricio Carneiro 4f8230c750 Merged bug fix from Stable into Unstable		2011-07-14 16:44:57 -04:00
..
examples	moving the example scala scripts to the qscripts package.	2011-07-01 16:14:59 -04:00
lib	moving the example scala scripts to the qscripts package.	2011-07-01 16:14:59 -04:00
DataProcessingPipeline.scala	more progress report for the Data Processing Pipeline.	2011-07-13 14:53:58 -04:00
GATKResourcesBundle.scala	new home for the core qscripts	2011-06-30 11:32:06 -04:00
MethodsDevelopmentCallingPipeline.scala	Making the outputDir optional. Default = ./	2011-07-05 16:30:41 -04:00
RecalibrateBaseQualities.scala	Recalibrates a list of bam files allowing multiple bams to be recalibrated out of a single 'mother' queue job.	2011-07-14 16:42:17 -04:00
StandardVariantEvaluation.scala	new home for the core qscripts	2011-06-30 11:32:06 -04:00