Eric Banks 937ac7290f Lots more GGA fixes for the HC now that I understand what's going on internally. Integration tests pass except for the GGA test which I believe now produces better results.		2012-11-20 16:13:29 -05:00
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gatk	Lots more GGA fixes for the HC now that I understand what's going on internally. Integration tests pass except for the GGA test which I believe now produces better results.	2012-11-20 16:13:29 -05:00
utils	Do not let reduced reads get removed in the contamination down-sampling	2012-10-26 02:13:04 -04:00
package-info.java	build system overhaul	2012-05-17 15:16:29 -04:00