gatk3的最后一个经典版本3.8

ebanks 4efe26c59a Major: allow genotyper to optionally output in 1KG format, including outputting the samples in which indels are found. ... Minor: refactor 454 filtering git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1300 348d0f76-0448-11de-a6fe-93d51630548a		2009-07-23 19:53:51 +00:00
R	Updated python files	2009-07-07 14:15:39 +00:00
c	Move non-java code out of playground.	2009-03-23 19:31:38 +00:00
doc	moved to wiki	2009-07-22 16:35:23 +00:00
java	Major: allow genotyper to optionally output in 1KG format, including outputting the samples in which indels are found.	2009-07-23 19:53:51 +00:00
packages	Packaging cleanup.	2009-07-14 21:00:02 +00:00
perl	sortByRef now supports x:y location syntax	2009-07-07 16:42:40 +00:00
python	CoverageEval.py tool right before some major changes to the core of the code	2009-07-22 16:58:23 +00:00
settings	Switched to Reflections (http://code.google.com/p/reflections/) project for	2009-07-21 18:32:22 +00:00
shell	Version 0.2.1 (released) of the TableRecalibrator	2009-06-25 22:50:55 +00:00
testdata	Derive examples from real data.	2009-07-10 04:21:37 +00:00
build.xml	added the abilty to build the jar's to a different location, like the following:	2009-07-23 04:06:58 +00:00
ivy.xml	Switched to Reflections (http://code.google.com/p/reflections/) project for	2009-07-21 18:32:22 +00:00