Ryan Poplin 4ed06801a7 Updating HaplotypeCaller's HMM calc to use GOP as a function of the read instead of a function of the haplotype in preparation for IQSR		2012-02-02 10:17:04 -05:00
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config	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
src	Updating HaplotypeCaller's HMM calc to use GOP as a function of the read instead of a function of the haplotype in preparation for IQSR	2012-02-02 10:17:04 -05:00
test	Fixed discordance bug reported by Brad Chapman	2012-01-30 09:50:45 -05:00