Louis Bergelson e1c41b2c38 Updated gatk so it compiles on java 8 ... updated cofoja to 1.2 from 1.0 added explicit type casts in places that java 8 required them		2015-06-26 15:59:46 -04:00
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code/cofoja/cofoja/1.2-20140817	Updated gatk so it compiles on java 8	2015-06-26 15:59:46 -04:00