Ron Levine 645d418015 Changed hardcoded downsampling max/min coverage values to parameters ... Rename parameters using camel case and add to integration test Correct documentation for maxReadsInRegionPerSample and minReadsPerAlignmentStart Change the argument--minReadsPerAlignmentStart in the integration test from 50 to 5 'each genomic location' only pertains to minReadsPerAlignmentStart, not maxReadsInRegionPerSample		2014-10-09 17:09:26 -04:00
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src	Changed hardcoded downsampling max/min coverage values to parameters	2014-10-09 17:09:26 -04:00
pom.xml	Now passing in the path to the GATK directory to tests.	2014-09-02 01:40:59 +08:00