kshakir 4d611e53e7 Passing the ADPR R script to FCPTest. ... Changed the FCP.q to use an InProcessFunction work around the -runDir issue GSA-420. Tested the FCPTest using the following dotkits and "ant clean pipelinetest -Dpipeline.run=run": - R-2.11 - Oracle-full-client - .cx-oracle-5.0.2-python-2.6.5-oracle-full-client-11.1 git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5029 348d0f76-0448-11de-a6fe-93d51630548a		2011-01-20 06:08:45 +00:00
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qscript	Passing the ADPR R script to FCPTest.	2011-01-20 06:08:45 +00:00
src/org/broadinstitute/sting	VQSR now only uses the valid polymorphic sites for training and truth sensitivity calculations. Any number of tracks whose ROD binding begins with the name truth can be used as truth sensitivity tracks.	2011-01-18 20:48:19 +00:00
test/org/broadinstitute/sting/queue	Passing the ADPR R script to FCPTest.	2011-01-20 06:08:45 +00:00