gatk3的最后一个经典版本3.8

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Geraldine Van der Auwera 4d20c71e09 Improvements to various gatkdocs - Make -rod required - Document that contaminationFile is currently not functional with HC - Document liftover process more clearly - Document VariantEval combinations of ST and VE that are incompatible - Added a caveat about using MVLR from HC and UG. - Added caveat about not using -mte with -nt - Clarified masking options - Fixed docs based on Erics comments		2013-08-10 10:01:31 -07:00
licensing	deleted old license files	2013-07-02 16:36:47 -04:00
protected	Improvements to various gatkdocs	2013-08-10 10:01:31 -07:00
public	Improvements to various gatkdocs	2013-08-10 10:01:31 -07:00
settings	Rev picard to get optimized tribble feature reads	2013-08-02 10:31:36 -04:00
.gitignore	Detect stuck lock-acquisition calls, and disable file locking for tests	2013-04-24 22:49:02 -04:00
README.md	Update README file for the 2.6 release	2013-06-20 13:08:29 -04:00
build.xml	build.xml: make ant -p output only important build targets	2013-07-19 14:35:00 -04:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Brought all of ReduceReads to fastutils	2013-02-23 22:53:23 -05:00

The Genome Analysis Toolkit