gatk-3.8/scala/qscript/oneoffs
rpoplin 825682f58c oops, putting the script back into a sensible state
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5765 348d0f76-0448-11de-a6fe-93d51630548a
2011-05-04 20:17:05 +00:00
..
carneiro recalibrates a dataset splitting between good and bad regions for comparison (used to be named justRecalibrate) 2011-05-03 21:43:09 +00:00
chartl Renaming ContrastiveRecalibrator --> VariantRecalibrator in preparation for move to core 2011-05-03 18:12:47 +00:00
delangel Walkers can now specify a class extending from Gatherer to merge custom output formats. Add @Gather(MyGatherer.class) to the walker @Output. 2011-03-24 14:03:51 +00:00
depristo GATK Resource bundle, latest version (now with b37 -> b36 support). Oneoff scala script that assesses chip coverage of calls 2011-04-27 22:01:36 +00:00
fromer Walkers can now specify a class extending from Gatherer to merge custom output formats. Add @Gather(MyGatherer.class) to the walker @Output. 2011-03-24 14:03:51 +00:00
hanna Incorporating Khalid's feedback. 2011-04-08 16:22:49 +00:00
kshakir Walkers can now specify a class extending from Gatherer to merge custom output formats. Add @Gather(MyGatherer.class) to the walker @Output. 2011-03-24 14:03:51 +00:00
rpoplin oops, putting the script back into a sensible state 2011-05-04 20:17:05 +00:00
QTools.q Generalized association is now working. Output is in a horrific format. Implementation of T-testing. Improvements are to look for classes dynamically (a la VariantEval/VariantAnnotator), beautify output, and do optimizations where they exist. 2011-03-01 01:23:37 +00:00