gatk3的最后一个经典版本3.8

David Roazen 4c0a3b182e Update MD5s to reflect version number change in the BAM header ... I've confirmed via a script that all of these differences only involve the version number bump in the BAM headers and nothing else: < @HD VN:1.0 GO:none SO:coordinate --- > @HD VN:1.4 GO:none SO:coordinate		2013-02-01 12:45:46 -05:00
licensing	Refrain from pushing symlinks into the repo... not all filesystems treat it correctly	2013-01-22 15:18:19 -07:00
protected/java	Update MD5s to reflect version number change in the BAM header	2013-02-01 12:45:46 -05:00
public	Update MD5s to reflect version number change in the BAM header	2013-02-01 12:45:46 -05:00
settings	Rev picard, sam-jdk, and tribble	2013-01-31 16:32:45 -05:00
.gitignore	Fixing the licensing scripts	2013-01-26 13:42:49 -05:00
build.xml	Move AWS keys to a resources subdirectory within the phonehome package	2013-01-31 11:56:34 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	ReadBackedPileup cleanup	2013-01-11 15:17:18 -05:00