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4bc04e2a9e
gatk-3.8
/
public
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java
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Guillermo del Angel
4bc04e2a9e
Correct way in which start/stop positions in a VC are computed when creating an indel VC. Old way was incorrect in case GENOTYPE_GIVEN_ALLELES was specified with a complex record. New way should work in general for all cases and is simpler.
2012-05-23 21:19:30 -04:00
..
config
Reorganized the codebase beneath top-level public and private directories,
2011-06-28 06:55:19 -04:00
src
Correct way in which start/stop positions in a VC are computed when creating an indel VC. Old way was incorrect in case GENOTYPE_GIVEN_ALLELES was specified with a complex record. New way should work in general for all cases and is simpler.
2012-05-23 21:19:30 -04:00
test
Don't compute QD if there is no QUAL; added integration test for this
2012-05-03 11:02:37 -04:00