..
VectorPairHMM
Update pom versions to mark the start of GATK 3.6 development
2015-11-25 01:52:51 -05:00
c
After renaming the packages, instead of updating the JNI library used for testing bwa, moving the classes to the archive.
2014-05-19 17:36:41 -04:00
chainFiles
The contig is named MT not M in b36. Delivers PT68890442.
2014-04-08 10:03:47 -04:00
doc
Updated readme in public/doc to just point to the website
2015-03-12 11:52:48 -04:00
external-example
Update pom versions to mark the start of GATK 3.6 development
2015-11-25 01:52:51 -05:00
gatk-engine
Update pom versions to mark the start of GATK 3.6 development
2015-11-25 01:52:51 -05:00
gatk-queue
Update pom versions to mark the start of GATK 3.6 development
2015-11-25 01:52:51 -05:00
gatk-queue-extensions-generator
Update pom versions to mark the start of GATK 3.6 development
2015-11-25 01:52:51 -05:00
gatk-queue-extensions-public
Update pom versions to mark the start of GATK 3.6 development
2015-11-25 01:52:51 -05:00
gatk-root
Update pom versions to mark the start of GATK 3.6 development
2015-11-25 01:52:51 -05:00
gatk-tools-public
LeftAlignAndTrimVariants --splitMultiallelics keeps GT if valid
2015-12-14 10:42:32 -05:00
gatk-utils
MQ of Mate RankSum annotation
2015-12-23 10:24:40 -05:00
gsalib
Update pom versions to mark the start of GATK 3.6 development
2015-11-25 01:52:51 -05:00
java /config
Refactored maven directories and java packages replacing "sting" with "gatk".
2014-05-19 17:36:39 -04:00
package-tests
Update pom versions to mark the start of GATK 3.6 development
2015-11-25 01:52:51 -05:00
repo
Updated gatk so it compiles on java 8
2015-06-26 15:59:46 -04:00
src /main
Added faster built executable, non-packaged jars.
2014-11-05 00:30:46 +08:00
pom.xml
Update pom versions to mark the start of GATK 3.6 development
2015-11-25 01:52:51 -05:00
eb6bdb2a62