Eric Banks 7cf4b63d76 Disabling indel quals in BaseRecalibrator as it should be, not PrintReads.		2012-08-01 09:23:04 -04:00
..
examples	AggregateMetrics:	2012-04-17 11:45:32 -04:00
lib	Mostly small changes to my own scala scripts: .vcf.gz compatibility for output files, smarter beagle generation, simple script to scatter-gather combine variants. Whole genome indel calling now uses the gold standard indel set.	2012-02-22 17:20:04 -05:00
DataProcessingPipeline.scala	Disabling indel quals in BaseRecalibrator as it should be, not PrintReads.	2012-08-01 09:23:04 -04:00
GATKResourcesBundle.scala	Merge branch 'master' of ssh://gsa1.broadinstitute.org/humgen/gsa-scr1/gsa-engineering/git/unstable	2012-03-13 09:28:16 -04:00
MethodsDevelopmentCallingPipeline.scala	Turning off PHONE HOME option in the MDCP	2012-01-27 11:13:30 -05:00
PacbioProcessingPipeline.scala	Disabling indel quals in BaseRecalibrator as it should be, not PrintReads.	2012-08-01 09:23:04 -04:00