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David Roazen 4b17f34640 Fixes to the packaging system to work with the new directory structure. 
Also added a few R scripts to the list of files to include in the resources
directory of the binary distribution, at Ryan's request.
 		2011-06-30 18:27:17 -04:00
..
Aligner.xml Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
AnalyzeCovariates.xml Fixes to the packaging system to work with the new directory structure. 2011-06-30 18:27:17 -04:00
CreatePackager.xsl Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
FindContaminatingReadGroups.xml Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
GATK-Picard.xml Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
GATKEngine.xml Fixes to the packaging system to work with the new directory structure. 2011-06-30 18:27:17 -04:00
GATKResources.xml Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
GenomeAnalysisTK.xml Fixes to the packaging system to work with the new directory structure. 2011-06-30 18:27:17 -04:00
IndelGenotyper.xml Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
LocalRealignmentAroundIndels.xml Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
PicardPrivate.xml Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
QualityScoresRecalibration.xml Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
Queue.xml Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
RMDIndexer.xml Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
UnifiedGenotyper.xml Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
VariantAnnotator.xml Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
VariantEval.xml Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
VariantFiltration.xml Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
VariantRecalibration.xml Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00