Mark DePristo 4ad330008d Final intervals cleanup ... -- No functional changes (my algorithm wouldn't work) -- Major structural cleanup (returning more basic data structures that allow us to development new algorithm) -- Unit tests for the efficiency of interval partitioning		2011-09-19 10:19:10 -04:00
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R	Merge branch 'master' into sgintervals	2011-09-19 09:50:19 -04:00
c	Reinitialize random seed in the bwa bindings from the fixed seed stored in the	2011-07-22 13:41:53 -04:00
chainFiles	…
doc	…
java	Final intervals cleanup	2011-09-19 10:19:10 -04:00
packages	Removing some old cruft from the packages dir. Updating AnalyzeCovariates to include all Covariates.	2011-09-12 15:09:25 -04:00
perl	Update to the bindings for liftOverVCF.pl (to -V from -B)	2011-09-15 15:33:09 -04:00
scala	Merge branch 'master' into sgintervals	2011-09-19 09:50:19 -04:00
testdata	GZIP VCF for testing	2011-08-19 09:05:39 -04:00