carneiro 4a84a81d17 SelectVariants: added parameters for mendelian violation. Given a trio vcf, it will generate a VCF with the sites that are mendelian violations. ... GenotypeAndValidate: now annotates the validations with callStatus. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5425 348d0f76-0448-11de-a6fe-93d51630548a		2011-03-11 17:47:53 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src	SelectVariants: added parameters for mendelian violation. Given a trio vcf, it will generate a VCF with the sites that are mendelian violations.	2011-03-11 17:47:53 +00:00
test	Initial commit of VQSRv2 that passes the old integration tests. Not ready to be used yet unless your name rhymes with ... oh wait, that's me.	2011-03-11 15:18:34 +00:00