gatk-3.8/java/src/org/broadinstitute/sting/gatk/traversals
hanna 02f48b6457 Fix bug that's been in the GATK for a very long time: update nReads (as well
as nRecords), so that INFO logging doesn't say 'skipped 0 of 0 reads'.  While
I'm in there, update TraversalStatistics to store longs.


git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2959 348d0f76-0448-11de-a6fe-93d51630548a
2010-03-08 22:44:54 +00:00
..
TraversalEngine.java Reduce by interval alterations to interface with new sharding system. This checkin with be followed by a 2010-02-25 00:16:50 +00:00
TraversalStatistics.java Fix bug that's been in the GATK for a very long time: update nReads (as well 2010-03-08 22:44:54 +00:00
TraverseDuplicates.java Reduce by interval alterations to interface with new sharding system. This checkin with be followed by a 2010-02-25 00:16:50 +00:00
TraverseLoci.java Reduce by interval alterations to interface with new sharding system. This checkin with be followed by a 2010-02-25 00:16:50 +00:00
TraverseLocusWindows.java Reduce by interval alterations to interface with new sharding system. This checkin with be followed by a 2010-02-25 00:16:50 +00:00
TraverseReads.java Fix bug that's been in the GATK for a very long time: update nReads (as well 2010-03-08 22:44:54 +00:00
package-info.java Turn javadoc comments for packages and classes into key/value pairs in a properties file. Embed the properties file 2009-12-04 20:08:41 +00:00