chartl 496ecc8186 Change in how overall coverage and means are stored in the DOCS object; change from keeping track of sample mean coverage to keeping track of sample total coverage (calculate means at the end) ... This is a mid-way commit for Aaron git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2895 348d0f76-0448-11de-a6fe-93d51630548a		2010-02-26 15:51:12 +00:00
..
config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src	Change in how overall coverage and means are stored in the DOCS object; change from keeping track of sample mean coverage to keeping track of sample total coverage (calculate means at the end)	2010-02-26 15:51:12 +00:00
test/org/broadinstitute/sting	Support for no qual fields in VCF; better support for Mendelian violation calculations	2010-02-26 00:29:17 +00:00