Mauricio Carneiro 489c15b99d Fixed indexing issue in coordinate conversion ... When a read had been previously soft clipped, the UnclippedEnd could not be used directly as Reference Coordinate for clipping , because the read does not go that far.		2011-08-15 01:42:34 -04:00
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config	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
src	Fixed indexing issue in coordinate conversion	2011-08-15 01:42:34 -04:00
test	Removed a public -> private dependency in our test suite.	2011-08-12 17:29:10 -04:00