ebanks 471c18054f Fix for SB calculation: the best overall AF might not have any mass when just looking at reads from a single strand. We need to compute the best AF for each stratification. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4505 348d0f76-0448-11de-a6fe-93d51630548a		2010-10-15 17:51:18 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src	Fix for SB calculation: the best overall AF might not have any mass when just looking at reads from a single strand. We need to compute the best AF for each stratification.	2010-10-15 17:51:18 +00:00
test	Adding an integration test (against hg18 this time) that requires on-the-fly sorting in order to work properly.	2010-10-15 07:45:21 +00:00