Ami Levy-Moonshine 4714ccc284 change the way CombineVariants check the priority arguments in order to throw error when the genotypeMergeOption argument is set to PRIORITIZE but PRIORITY_STRING is not provided		2012-11-21 10:47:35 -05:00
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R	Fix a nasty bug in reading GATK reports with a single line	2012-09-10 20:14:13 -04:00
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java	change the way CombineVariants check the priority arguments in order to throw error when the genotypeMergeOption argument is set to PRIORITIZE but PRIORITY_STRING is not provided	2012-11-21 10:47:35 -05:00
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packages	Removed 'Walker' suffix from packages/GATKEngine.xml that were breaking the packaged release.	2012-07-23 16:32:31 -04:00
perl	Split out contig names from Reference .fai file on white space (to support the GATK resource bundle's file human_g1k_v37.fasta.fai.gz, which does not use tab delimiters)	2012-06-07 16:56:32 -04:00
scala	Rename hg19 files in bundle to b37 since that's what they are	2012-11-14 11:47:09 -05:00
testdata	Reverting move of BQSR tests to public, as per DR's email	2012-07-19 10:02:05 -04:00