Mark DePristo e0c189909f Added support for breakpoint alleles ... -- See https://getsatisfaction.com/gsa/topics/support_vcf_4_1_structural_variation_breakend_alleles?utm_content=topic_link&utm_medium=email&utm_source=new_topic -- Added integrationtest to ensure that we can parse and write out breakpoint example		2012-02-23 12:14:48 -05:00
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hapmap	Renaming the HapMap codec and feature to RawHapMap so that we don't get esoteric errors when trying to bind a rod with the name 'hapmap' (since it was also a feature).	2011-08-12 11:11:56 -04:00
vcf	Added support for breakpoint alleles	2012-02-23 12:14:48 -05:00