gatk-3.8

History

Mark DePristo 1ca13f9581 Fundamentally better model for the NanoScheduler -- Now each map job reads a value, performs map, and does as much reducing as possible. This ensures that we scale performance with the nct value, so -nct 2 should result in 2x performance, -nct 3 3x, etc. All of this is accomplished using exactly NCT% of the CPU of the machine. -- Has the additional value of actually simplifying the code -- Resolves a long-standing annoyance with the nano scheduler.	2012-12-19 09:31:31 -05:00
..
net/sf	Cleanup of VCF header lines and constants, BCF2 bugfixes	2012-06-21 15:16:31 -04:00
org/broadinstitute/sting	Fundamentally better model for the NanoScheduler	2012-12-19 09:31:31 -05:00

Mark DePristo 1ca13f9581 Fundamentally better model for the NanoScheduler

-- Now each map job reads a value, performs map, and does as much reducing as possible.  This ensures that we scale performance with the nct value, so -nct 2 should result in 2x performance, -nct 3 3x, etc.  All of this is accomplished using exactly NCT% of the CPU of the machine.
-- Has the additional value of actually simplifying the code
-- Resolves a long-standing annoyance with the nano scheduler.

2012-12-19 09:31:31 -05:00

net/sf

Cleanup of VCF header lines and constants, BCF2 bugfixes

2012-06-21 15:16:31 -04:00

org/broadinstitute/sting

Fundamentally better model for the NanoScheduler

2012-12-19 09:31:31 -05:00