gatk-3.8/java
ebanks e50627a49e 1. Updated tests and added integration test for liftover code.
2. Updated liftover code (and scripts) to emit vcf 4.0 and no longer depend on VCFRecord.
3. Beagle walker now also emits vcf 4.0.



git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3767 348d0f76-0448-11de-a6fe-93d51630548a
2010-07-12 17:58:18 +00:00
..
config Provide a default logger, some config settings, and some doc updates. 2009-04-29 02:06:05 +00:00
src 1. Updated tests and added integration test for liftover code. 2010-07-12 17:58:18 +00:00
test 1. Updated tests and added integration test for liftover code. 2010-07-12 17:58:18 +00:00