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gatk-3.8/java/test/net/sf/samtools
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hanna deab9f0aa5 Initial work on proto-shard merger: 
- create size() method that returns an approximation of the uncompressed size in bytes of BAM span.
  I'll use this method as a protoshard weighting function until we determine how to normalize the
  weights across the different data access mechanisms (reads, reference, RODs).
- Implementations of basic union/intersection/subtraction mechanisms for BAM spans; should be enough
  to get an accurate weight for two proto-shards put together.


git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5541 348d0f76-0448-11de-a6fe-93d51630548a
 		2011-03-30 22:03:43 +00:00
..
GATKBAMFileSpanUnitTest.java Initial work on proto-shard merger: 2011-03-30 22:03:43 +00:00
GATKChunkUnitTest.java Initial work on proto-shard merger: 2011-03-30 22:03:43 +00:00