gatk-3.8/public/scala
Christopher Hartl 810996cfca Introducing: VariantsToPed, the world's most annoying walker! And also a busted QScript to run it that I need Khalid's help debugging ( frownie face ). Note that VariantsToPed and PlinkSeq generate the same binary file (up to strand flips...thanks PlinkSeq), so I know it's working properly. Hooray! 2012-02-01 10:39:03 -05:00
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qscript/org/broadinstitute/sting/queue/qscripts Introducing: VariantsToPed, the world's most annoying walker! And also a busted QScript to run it that I need Khalid's help debugging ( frownie face ). Note that VariantsToPed and PlinkSeq generate the same binary file (up to strand flips...thanks PlinkSeq), so I know it's working properly. Hooray! 2012-02-01 10:39:03 -05:00
src/org/broadinstitute/sting/queue fixing bug with fastq extension 2012-01-24 11:02:15 -05:00
test/org/broadinstitute/sting/queue Device files like /dev/null are now tracked as special by Queue and are not used to generate .out file paths, scattered into a temporary directory, gathered, deleted, etc. 2012-01-23 16:17:04 -05:00