gatk-3.8/public/java/src/org/broadinstitute/sting
Mark DePristo 458bbdee8f Add useful logger.info telling us the mismatch and indel context sizes 2012-08-12 10:27:05 -04:00
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alignment Adding categories for the remaining uncategorized walkers 2012-07-30 11:35:08 -04:00
commandline GATK Error messages now point to the new website instead of GetSatisfaction. 2012-07-20 17:27:11 -04:00
gatk Adding support of X and = CIGAR operators to the GATK 2012-08-10 14:54:07 -04:00
jna Device files like /dev/null are now tracked as special by Queue and are not used to generate .out file paths, scattered into a temporary directory, gathered, deleted, etc. 2012-01-23 16:17:04 -05:00
queue Removed 'Walker' suffix from packages/GATKEngine.xml that were breaking the packaged release. 2012-07-23 16:32:31 -04:00
utils Add useful logger.info telling us the mismatch and indel context sizes 2012-08-12 10:27:05 -04:00