| .. |
|
VectorPairHMM
|
Changed 'sting' to 'gatk' in the VectorLoglessPairHMM classes and the
|
2014-05-19 17:36:41 -04:00 |
|
c
|
After renaming the packages, instead of updating the JNI library used for testing bwa, moving the classes to the archive.
|
2014-05-19 17:36:41 -04:00 |
|
chainFiles
|
The contig is named MT not M in b36. Delivers PT68890442.
|
2014-04-08 10:03:47 -04:00 |
|
doc
|
Refactored maven directories and java packages replacing "sting" with "gatk".
|
2014-05-19 17:36:39 -04:00 |
|
external-example
|
Refactored maven directories and java packages replacing "sting" with "gatk".
|
2014-05-19 17:36:39 -04:00 |
|
gatk-engine
|
Refactored maven directories and java packages replacing "sting" with "gatk".
|
2014-05-19 17:36:39 -04:00 |
|
gatk-queue
|
Refactored maven directories and java packages replacing "sting" with "gatk".
|
2014-05-19 17:36:39 -04:00 |
|
gatk-queue-extensions-generator
|
Refactored maven directories and java packages replacing "sting" with "gatk".
|
2014-05-19 17:36:39 -04:00 |
|
gatk-queue-extensions-public
|
From Carlos Barroto: made 'level' in Picard's CalculateHsMetrics Scala Queue extension an argument.
|
2014-06-19 11:06:50 -04:00 |
|
gatk-root
|
Refactored maven directories and java packages replacing "sting" with "gatk".
|
2014-05-19 17:36:39 -04:00 |
|
gatk-tools-public
|
Recast the "Invalid JEXL expression detected" error in SelectVariants from a RuntimeException to a UserException
|
2014-06-20 00:05:23 -04:00 |
|
gatk-utils
|
Changed 'sting' to 'gatk' in the VectorLoglessPairHMM classes and the
|
2014-05-19 17:36:41 -04:00 |
|
gsalib
|
Refactored maven directories and java packages replacing "sting" with "gatk".
|
2014-05-19 17:36:39 -04:00 |
|
java/config
|
Refactored maven directories and java packages replacing "sting" with "gatk".
|
2014-05-19 17:36:39 -04:00 |
|
package-tests
|
Refactored maven directories and java packages replacing "sting" with "gatk".
|
2014-05-19 17:36:39 -04:00 |
|
perl
|
Fixing the liftover script to not require strict VCF header validation.
|
2013-11-07 09:02:17 -05:00 |
|
repo
|
Refactored maven directories and java packages replacing "sting" with "gatk".
|
2014-05-19 17:36:39 -04:00 |
|
pom.xml
|
Refactored maven directories and java packages replacing "sting" with "gatk".
|
2014-05-19 17:36:39 -04:00 |
65eeb4a7ab