gatk3的最后一个经典版本3.8

Mark DePristo 42bf9adede Initial version of "fast" FragmentPileup code ... -- Uses mayOverlapRoutine in ReadUtils -- Attempts to be smart when doing overlap calculation, to avoid unnecessary allocations -- PileupElement now comparable (sorts on offset than on start) -- Caliper microbenchmark to assess performance		2011-10-22 21:36:37 -04:00
public	Initial version of "fast" FragmentPileup code	2011-10-22 21:36:37 -04:00
settings	Merged bug fix from Stable into Unstable	2011-09-27 14:34:39 -04:00
LICENSE	One last test...	2011-06-28 19:18:17 -04:00
build.xml	Merged bug fix from Stable into Unstable	2011-10-16 07:37:20 -04:00
ivy.xml	Recalibrator now uses the much more efficient NGSPlatform in the cycle covariates system	2011-10-21 09:39:21 -04:00