Mauricio Carneiro 77a03c9709 Patching special case in the adaptor clipping ... * if the adaptor boundary is more than MAXIMUM_ADAPTOR_SIZE bases away from the read, then let's not clip anything and consider the fragment to be undetermined for this read pair. * updated md5's accordingly		2012-01-11 17:47:44 -05:00
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broadinstitute/sting	Patching special case in the adaptor clipping	2012-01-11 17:47:44 -05:00