gatk-3.8/public/java
Mauricio Carneiro 77a03c9709 Patching special case in the adaptor clipping
* if the adaptor boundary is more than MAXIMUM_ADAPTOR_SIZE bases away from the read, then let's not clip anything and consider the fragment to be undetermined for this read pair.
   * updated md5's accordingly
2012-01-11 17:47:44 -05:00
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config Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
src Patching special case in the adaptor clipping 2012-01-11 17:47:44 -05:00
test Patching special case in the adaptor clipping 2012-01-11 17:47:44 -05:00